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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846975.1_cds_XP_016509855.1_22753
CDS Infomation

[gene=LOC107827274] [db_xref=GeneID:107827274] [protein=tRNA pseudouridine synthase A-like isoform X2] [protein_id=XP_016509855.1] [location=join(23114..23185,23426..23534,25459..25598,25685..26047,27473..27709)] [gbkey=CDS]
Sequence

ATGTGTTTTTCAGCAGCTTTGGCACTTCCATCAATTCCCAATCTCGAGCTTTCTTCTTCC
AATTCTACCTCTAATTGGAGTGGAAAGGACGAAGATCCAAATAAGAGTCAAGCGGTGAAA
TTGTCATTACCAGCTTATAAATGGCGCTTTGTTATTGCTTACGACGGTACCAGATTTTCA
GGATGGCAGTATCAGCAGTCAACACCTACTATACAGTGCATTCTGGAAGAAGCTCTGACT
ACAATAACAAAATTAAACCGCAAAGATCTTTGCTCAGTTGGTGCAAGTCGAACAGATGCA
GGCGTTCATGCATTGGGTCAGGTGGGACACTTCATTACGCCTTTCAACTATGAAACGCTA
GAAGGCGTTCACCAAGCTTTAAATGGTCTTCTTCCTTCTGATATCCGAGTTAGAGAAATC
AGCCCTGCGGTGCCTGAATTTCATGCTCGTTTCTCTGTCACAAGCAAGATTTATTGCTAC
CAAGTGTATAATTCCACTATCATGGACCCATTTACGAGGCACTATGCTTACCATAGCACA
TATAAACTCGACGCTGCTGTCATGAGAGTGGCTGCAGGGCATTTTTTGGGGAAACATGAC
TTTTCTGCCTTTGCCAATACATCACGAAATGACCGAGTGCCAAATCCAGTGAAGACAATT
TTTCGATTTGATGTTGTTGAAAAGGTTGCCTTGCTGCTTCAAGTTGGAAGACAAGCAGTT
CCACCTGATATTGTTGTTAGGATTTTGGAATCTCGTGATAGGAAGGAACTTGCGAAGTAT
GCCTTGCAAGTTCCACCTCACGGCCTTTGTCTCGAGACTATCAACTATAATGAAGAACAT
CTCAGACTTCCAACAGATTCCCCTGCAAGTAGTTTTGGTAGGCACCATAGTATAAGCTAT
TGTAAGGTGCCATTCATATGA

Peptide Sequence

PEP ID

XP_016509855.1
PEP Infomation

PREDICTED: tRNA pseudouridine synthase A-like isoform X2 [Nicotiana tabacum]
Sequence

MCFSAALALPSIPNLELSSSNSTSNWSGKDEDPNKSQAVKLSLPAYKWRFVIAYDGTRFS
GWQYQQSTPTIQCILEEALTTITKLNRKDLCSVGASRTDAGVHALGQVGHFITPFNYETL
EGVHQALNGLLPSDIRVREISPAVPEFHARFSVTSKIYCYQVYNSTIMDPFTRHYAYHST
YKLDAAVMRVAAGHFLGKHDFSAFANTSRNDRVPNPVKTIFRFDVVEKVALLLQVGRQAV
PPDIVVRILESRDRKELAKYALQVPPHGLCLETINYNEEHLRLPTDSPASSFGRHHSISY
CKVPFI

Transcript Sequence

Gene sequence data has not been registered.